Cladistics and polychaetes


Rouse G.W. & Fauchald K. 1997. Cladistics and polychaetes. Zoologica Scripta 26: 139-204

ABSTRACT

A series of cladistic analyses assess the status and membership of the taxon Polychaeta. The available literature, and a review by Fauchald & Rouse (1997), on the 80 accepted families of the Polychaeta is used to develop characters and data matrices. As well as the polychaete families, non-polychaete taxa such as the Echiura, Euarthropoda, Onychophora, Pogonophora (as Frenulata and Vestimentifera), Clitellata, Aeolosomatidae and Potamodrilidae are included in the analyses. All trees are rooted using the Sipuncula as outgroup. Characters are based on features (where present) such as the prostomium, peristomium, antennae, palps, nuchal organs, parapodia, stomodaeum, segmental organ structure and distribution, circulation and chaetae. A number of analyses are performed involving different ways of coding and weighting the characters, as well as the number of taxa included. Transformation series are provided for several of these analyses. One of the analyses is chosen to provide a new classification. The Annelida is found to be monophyletic, though weakly supported, and comprises the Clitellata and Polychaeta. The Polychaeta is monophyletic only if taxa such as the Pogonophora, Aeolosomatidae and Potamodrilidae are included and is also weakly supported. The Pogonophora is reduced to the rank of family within the Polychaeta and reverts to the name Siboglinidae Caullery, 1914. The new classification does not use Linnaean categories and the Polychaeta comprises two clades, the Scolecida and Palpata. The Palpata has the clades Aciculata and Canalipalpata. The Aciculata contains the Phyllodocida and Eunicida. The Canalipalpata has three clades; the Sabellida (including the Siboglinidae) Spionida and Terebellida. The position of a number of families requires further investigation.


'Cladistics and polychaetes' contains two data matrices. One of these is coded according to the method known as A/P coding (Pleijel F. 1995. On character coding for phylogeny reconstruction. Cladistics 11: 309-315). The other is a more traditional multistate character matrix. The A/P matrix was analysed using all characters weighed equally (as 1) and also with an a priori differential weighting scheme. The A/P matrix is provided in two versions, one with equal weights (A/Pe) and one with differential weights (A/Pw). The matrices for A/P coding are downloadable in Nexus format (MacClade, PAUP readable) files and as Hennig 86 files. The multistate matrix is only available in Nexus format, since Hennig 86 will not accomodate more than 9 character states. The multistate characters are all unordered. The analyses in 'Cladistics and polychaetes' were also run using complete and restricted taxa sets. All taxa are included in each matrix and the 29 not included in the 'restricted analyses' can be excluded if required. For further details on characters, homology arguments and scoring justifications see:

Fauchald K, Rouse GW. 1997. Polychaete systematics: Past and present. Zoologica Scripta 26: 71-138.
Rouse GW, Fauchald K. 1997. Cladistics and polychaetes. Zoologica Scripta 26: 139-204.


Characters

A/P coding

Multistate coding 

Matrices

A/Pe matrix

Nexus format

Hennig86 format

A/Pw matrix

Nexus

Hennig86 format 

Multistate matrix

Nexus format

The various matrices can be downloaded from TreeBase. Search for Greg Rouse under author and it is listed as Cladistics and polychaetes.

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